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Raw microarray data have been curated and accepted in GEO (a public repository for microarray data, aimed at storing MIAME (Minimum Information About Microarray Experiments) compliant data in accordance with MGED (Microarray Gene Expression Data) recommendations.
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In this study, we compare common approaches to analyse non-compliant data in RCTs.
All analyses were performed using Partek® GS software (Copyright, Partek Inc .. MIAME-compliant data in MAGE-ML format has been submitted to the public microarray database ArrayExpress [ 34].
Intention to treat (ITT), as treated (AT) and per protocol (PP) are common approaches to analyse non-compliant data in RCTs.
The microarray data presented in this publication have been deposited in the MIAME compliant data base – NCBI's Gene Expression Omnibus (GEO, http://www.ncbi.nlm.nih.gov/geo/), and are accessible through GEO Series accession number GEO26084.
All data will be deposited in a MIAME compliant data base - accession number pending.
All the data present in the Central Database represented de-identified HIPAA compliant data.
MIAME-compliant data discussed in this publication has been deposited at the CFG (https://www.functionalglycomics.org/glycomics/publicdata/microarray.jsp; GLYCOv2 arrays), in NCBIs Gene Expression Omnibus (GEO, http://www.ncbi.nlm.nih.gov/geo/) and is accessible through GEO Series accession number GSE8726 (Mouse Genome 430 2.0 arrays).
All microarray data was deposited as MIAME-compliant data submissions GSE31378 in the Gene Expression Omnibus.
MIAME-compliant data have been deposited in the GEO database (http://www.ncbi.nlm.nih.gov/geo/, accession number GSE30699).
MIAME-compliant data sets are provided in the Gene Expression Omnibus (GEO) at the National Center for Biotechnology Information (http://www.ncbi.nlm.nih.gov/geo/) and can be accessed through GEO series accession number GSE18087.
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