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Since the C-terminal β-strand is recognized by both the PDZ domain of the DegS protein and by the BAM complex, studying the co-evolution of interacting residues in both cases would help in understanding the divergence of the C-terminal β-strands between different Gram-negative bacterial organisms.
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Figure 6: Exclusion effect in smE-box-BCDBD complex studied by MD simulations.
Zhang, L., Borthakur, S. & Buck, M. Dissociation of a dynamic protein complex studied by all-atom molecular simulations.
The complex studied significantly reduced the number of abdominal constrictions and stretching of hind limbs in mice.
Figure 5: Comparison of the SOA calculated from crystal structures and MD simulations, and the SOA of DNA-protein complexes studied by MD simulations.
The anchoring of the ligand carboxylate with Arg285 and Tyr223 is found for all complexes studied.
An overview of different chemical complexes studied by X-ray magnetic circular dichroism (XMCD) is presented.
We find that trisH+ preferentially stabilises the compact native-like state of the complexes studied here.
Of the complexes studied, manganese tetratolyl porphyrin (MnTTP) has shown the best activity and stability towards oxygen reduction.
Complex IV has two H-bonds but it is the second least stable structure among the hydrated complexes studied.
All the spectra of the complexes studied showed asym- νCOO-Co) basym- νCOO-Cogion (1586 – 1649) cm-1.
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