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By using the complete inferred protein sequences from ten diverse plant genomes (seven angiosperms plus the lycophyte Selaginella moellendorffii, the moss Physcomitrella, and the chlorophyte Chlamydomonas reinhardtii; see Figure  1), orthologous gene clusters (orthogroups) were identified that represent deeply conserved, but often narrowly defined gene families.

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This system is shown to be (1) sound and complete for inferring general from saturated CI statements and (2) complete for inferring general from general CI statements.

The results indicate that our methods exhibit good performance in terms of completing and inferring gene association networks with time-varying structures.

Phylogenetic studies upon complete mitochondrial genomes inferred that Echinococcus species probably begun to diverge during the Miocene, following the diversification of large mammals [1].

Based on three frame translations of all 1036 clusters, inferred complete or partial protein products were extracted from the largest ORF and used to query proteins in the NCBI NR database with the BLASTX tool.

Median coverage was 455-fold with 99.6% of exons found to be callable for the major cardiac N2BA isoform (ENST00000591111)and 98.4% callable for the Inferred Complete isoform (ENST00000589042).

Since the measurements only provide information of the output state for some of the possible inputs states, and each gene usually has multiple inputs, we set up rules in order to infer complete transfer functions to be able to simulate the inferred network's dynamics.

An interesting property of Hardy-Weinberg Equilibrium is that one can infer complete single-locus genotypic states from partial data (i.e. one can infer P AB, P BB, p, and q from P AA ).

Such tools, recently published, enable a user to solve classical problems related to RNA research: constructing 'structural' multiple alignments, inferring complete structures and structural motifs from RNA alignments, or searching structural homology in genomic databases.

In the presence of constant symbols, classical quantificational logic allows us to derive the sentence $\exists x \ a = x$ as a theorem, whence, by necessitation for complete sentences, we infer $\Box \exists x \ a= x$, which seems objectionable if $a$ is suppose to regiment a name for an object that exists only contingently.

We used a whole proteome phylogenetic analysis method which utilizes the oligopeptide content, i.e., frequency of amino acid K strings in the complete proteomes to infer the evolutionary relatedness of Shewanella species [24].

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