Sentence examples for complete an alignment from inspiring English sources

Realignment of all the LCBs from Mugsy with the FSA aligner ran in 358 min. Three other whole-genome alignment tools evaluated (MLAGAN, Pecan and Mauve) failed to complete an alignment of the four human chromosomes in <2 days of processing time.

The best candidate region is shown in Figure  3 where Panel A shows a complete alignment of the three L1MD_ T sequences with a putative breakpoint identified.

One problem is that computing time grows exponentially with the number of sequences because Hadamard conjugation considers the complete split space of an alignment.

Alignments yielding an E-value≤0.5 were selected and divided into four classes: Class A: alignments showing complete conservation of the active-site region, Class B: alignments showing partial conservation of the active-site region, Class C: alignments with proteases lacking an active-site annotation, and Class D: all other alignments.

With these data we constructed a complete PAD alignment (ClustalW) and a phylogenetic tree (Treeview), and mapped the different genes.

A complete alignment indicates low divergence, whereas an incomplete alignment indicates substantial divergence.

The results obtained from the implementation of a complete alignment system based on the new accelerator architecture in a Virtex-4 FPGA showed that the proposed techniques are feasible and the developed accelerator is able to provide speedups as high as 16 for the considered test sequences.

I assume that the complete multiple alignment A C can be decomposed into a multiple sequence alignment A Q among the query sequences in Q and the alignment A between A Q and the UA.

The genome sequences of B. microti CCM 4915 and B. pinnipedialis B2/94 were found to be remarkably conserved even at the nucleotide level, allowing to generate a complete alignment of the chromosomes of the two species from which a list of all indels (insertions and deletions) (available as Additional file 1, Table S1 and Additional file 2, Table S2) was easily obtained.

To enhance the speed of the alignment step, we use a tiered approach instead by dividing our alignment process into two steps: a fast initial assortment of the reads followed by a complete gapped alignment.

The combinatorial extension (CE) method is similar to DALI in that it too breaks each structure in the query set into a series of fragments that it then attempts to reassemble into a complete alignment.