This comprehensive list is a compilation of genes identified in whole genome wide infection studies [ 26] and bioinformatics analysis of Drosophila genes.
eQTLs data were downloaded from http://eqtl.uchicago.edu/cgi-bin/gbrowse/eqtl/ (last accessed February 10 , 2012 which is a compilation of eQTLs identified in eight large-scale studies in different human tissues (Zeller et al. 2010).
We also note that other tRNA databases, including part 1 of the bayreuth trna database, include genomic compilations of tRNAs identified in organisms that were generally selected based on technical (e.g., model systems), medical (e.g., pathogenic or obligate parasitic microbes), or biotechnological (e.g., crops of importance) criteria.
A compilation of tRNA genes identified by tRNAscan-SE (Lowe and Eddy, 1997) in complete or nearly complete genomes is available at http://lowelab.ucsc.edu/GtRNAdb.
Our compilation of experimental data identified 15 additional carbon sources that are utilized by all free-living enterobacteria (alpha-D-Glucose, D, L-Malic Acid, D-Alanine,D-Fructose,D-Fructose-6-Phosphate, D-Galactose, D-Glucose-1-Phosphate, D-Glucose-6-Phosphate, D-Ribose, Inosine, L-Aspartic Acid, L-Glutamic Acid, L-Serine, N-Acetyl-D-Glucosamine, Pyruvic Acid, and Uridine).
Compilation of the studies identifying common causes of TB would be extremely beneficial for the development of treatment and prevention strategies.
Therefore, our cgQTL tool was developed to provide the best current compilation of information to identify candidate genes for milk production in cattle, and will continue improving as we add more sources of information.
A recent compilation identified 13 miRNAs involved in plant responses to drought/salt stress [ 82].
The BPC group recognized human health impacts as critical to product sustainability and aligned on a Stewardship List [see box], a compilation of lists of chemicals identified by reputable authoritative bodies as known or suspected carcinogens, endocrine disruptors, reproductive toxicants, and PBTs.
Compilation of different works have identified over 200,000 phosphosites, 35,000 acetylation sites and 50,000 ubiquitylation sites for human proteins alone (www.phosphosite.org).org
However, the compilation of CIN genes does identify >100 genes with peripheral or poorly understood functions in genome integrity, and for many of these pathways the mechanism of CIN is not clear (Fig. 3).
