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Moreover, the heterogeneity between different institutions tends to be more detrimental than the gain in sample size when a breast cancer specific compendium is constructed.
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The compendium of gene expression responses was constructed by analyzing the individual studies in a collection of microarray studies to rank genes by their significance of differential expression within each study.
This compendium of 326 data points was constructed by combining the expression data for the five different conditions from [29] and normalizing the datasets such that data for each gene had zero mean and unit standard deviation across all experimental conditions.
GRNs related to tmem59 were constructed on a compendium of expression profiles by the parallelized SWNI algorithm.
Using a compendium of microarray gene expression data from the M3D database [30], networks were constructed for the 27 genes contained in the ROS pathway as defined by the EcoCyc database [1] (Figure 2).
Values were log2 transformed and each column was then normalized to have a mean of 0 and a variance of 1. EV values for each data compendium is given in Additional file 12. Functional similarity interactions (Fun-Net) were constructed using Gene Ontology (GO) annotations as defined in the Entrez Gene database, and also metabolic pathway annotations in the KEGG database.
(No sets were constructed).
Patriotism should be constructed.
Neither was constructed.
Paintings are constructed, right?
Therefore, this compendium is based on the basic principles and methodologies of structural complexity management.
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