We observed that 8/9 of the genomes with highest instability in these comparisons belong to animal pathogens, whereas this category represents about 62% of the genomes in our dataset; however, there is a significant association of instability with the taxonomic affiliation of the genomes, since 6 of these genomes come from the Firmicutes.
> > -wrap-foot> Althereh there was no significant difference between intervention and comparison villages in terms of mean wealth index score, a higher percentage of women in the comparison villages belonged to the two wealthiest quintiles (37 vs 29%, P < 0.05).
These two estimations might be inaccurate because of the limited numbers of sequences used for comparison, mostly belonging to highly and/or constitutively expressed genes.
We defined SU genes as those that were significantly upregulated in every comparison and that belonged to the INT or HE classes.
For the purpose of statistical model fitting only, we add a set of comparisons between genomes belonging to 32 genera (see Additional file 1), and the comparisons were made only within each genus.
This very complex computer paradigm was described in more detailed in the Additional file 1. Semantic classification, semantic comparison, and fact retrieval belonged to the third group of tasks (semantic processing of numbers vs. words).
This comparison showed that all belonged to HEV genotype 3. Sequences grouped within 4 previously proposed genotype 3 clusters (3a, 3c, 3e, and 3f) (3 ), of which cluster 3c is unique to the Netherlands.
The 173 strains from five countries that were used for comparison in this study belonged to clonal groups A (n = 148) and C (n = 17) which were globally spread and clonal group B (n = 8) which was found in Europe, Africa and Asia [ 29].
Additional pathogen-linked circuitry identified through comparisons of genomes belonging to the same genera: Additional circuits linked to pathogenicity could be identified using within-genera genome comparisons.
Finally, the analyzed intraspecies and congeneric comparisons concern species belonging to all three major ascidian groups of Aplousobranchia, Phlebobranchia, and Stolidobranchia, and thus they cover a wide phylogenetic range (tables 1 and 2).
