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If the comparison is extended to a larger paralogon than the set of ParaHox genes alone – as was done in this study -it becomes clear that in larger genomic regions there the constancy of gene numbers does not persist.
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Matching maps were compared, and for a selection of differences between the two strains the comparison was extended to the 10 strains used in this study using homology search based analyses.
Whenever possible, the SNP flanking sequence used in the human comparison was extended (up to 20,000 bp) using the bovine genome assembly, since the existing 500 bp flanking sequence did not produce a significant BLAST hit in most cases.
Here we aim both to extend this process, but also provide a model example of the difficulties that emerge as the comparisons are extended to higher taxonomic levels.
IREs were not detected using matrix analysis when pairwise comparisons were extended to include non-mammalian vertebrate species (data not shown).
The comparisons were extended to total hospital bed utilization and to patients who were still admitted to hospice wards during the peak period of the SARS epidemic.
What is immediately evident is that the level of conserved positions dropped rapidly when comparisons were extended above the taxonomic rank of family.
Genome comparisons were extended to a collection of ST17 and ST203 isolates and this reduced the amount of ST203 'unique' DNA to six chromosome regions.
Comparisons were extended with the computation of the net reclassification improvement (16) based on four categories of 5-year predicted probability (i.e., 0 to <2.5, 2.5 to <5, 5 to <7.5, and ≥7.5%).
In addition, the comparison with clathrin coats is extended.
Two-level ramp-comparison current control method is extended for the multilevel inverter using phase-shifted multi-carrier PWM.
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