Sentence examples for comparison between clusters from inspiring English sources
Third, a standard set of Representative Proteomes (RPs) would enable the scientific community to make direct comparison between clusters and annotations produced by various methods.
For example, every pairwise comparison between clusters should be informative as well as their holistic interpretation, foreshadowing the utility of this methodology for exploratory data analysis.
The annotation of genes was performed using the program Blast2GO (http://www.blast2go.org/), which provides a comparison between clusters of sequences obtained from public databases.
Clusters 2 and 3 were significantly different from one another (paired t test, t6 = 2.476, p = 0.048), but no other pairwise comparison between clusters was statistically different (paired t tests, 1 vs. 2: t6 = -1.138, p = 0.299; 1 vs 3: t6 = 1.341, p = 0.228).
Also, the mean of gene intensity in each cluster group was determined both for gene expression and DNA methylation for subsequent molecular intensity comparison between clustered phenotypes.
Even if the comparison between clustering algorithms is a complex task, we observed that k-means approach is more efficient to conserve gene associations.
Comparison between clustering analysis (UPGMA) and PCoA (Additional file 2) showed that the pattern of clustering the taxa was similar with both analyses: The individuals collected in the Gulf of Thailand clustered as single clade, whereas individuals collected in the Andaman Sea grouped together.
