Sentence examples for comparison alignment from inspiring English sources

6 BLAST comparison alignment using "bl2seq" (this is a selection on the BLAST site for aligning any two sequences) demonstrated that samples A and B are identical (see Table 4).

Similarity comparison: alignment, warp compensation, and calculating similarity scores between patches from the spectrograms.

Motif comparison (alignment) was performed using compare-matrices from RSAT.

In comparison, alignment of B. suis 1330 with B. melitensis 16M revealed a total of 7307 SNP for a total of 3,237,820 aligned nucleotides (0.23%).

To overcome the weakness of current approaches, an improved method called completely probabilistic biological network comparison alignment (C_PBNA) is proposed in this paper.

BLAST comparison alignment using "bl2seq" from NCBI of the sequences was then used in an attempt to further analyze the specimens using deposited sequences for known Borrelia spp. from Genomic Sequencing Center for Infectious Diseases, University of Maryland, USA, this time demonstrating the 64b serotype.

Comparison alignments used to identify the TonB-box were realized using ClustalW [64] (http://www.ebi.ac.uk/clustalw/) or Multalin [116] (http://prodes.toulouse.inra.fr/multalin/multalin.html) softwares.

Two fundamentally different methods are commonly employed for sequence comparison; alignment-based and alignment-free.

To focus on the taxa with the most incongruence, and to simplify the comparison, alignments were pruned to retain JD317 and eight isolates with the highest genetic similarity to it.

The presence of TM domain regions was verified using the TMHMM Server v. 2.0 [ 70] and their positions were subsequently confirmed by multiple sequence comparison alignments with the vertebrate homologues based on PRINTS annotation [ 71].

The motif-based comparison and alignment tool ExpaRNA [ 103] and the tree alignment program RNAforester [ 75] also rely on the algorithms provided by RNAlib.