Sentence examples similar to comparing with the assembly from inspiring English sources

However, assembly derived from 454 reads plus Illumina reads by using a single assembler did not provide much advantage as compared with the assembly of using only 454 reads.

Compared with the assembly tools used in the GAGE benchmarks, CloudBrush is shown to produce contigs with high precision and recall.

Combining different libraries typically did not improve the assemblies compared with the assembly of just library 24 (genome assembly quality has previously been shown to saturate and even worsen as sequencing depth increases [ Magoc et al. 2013]).

If ALLPATHS-LG is run in its cheat mode by guiding it with the same reference genome as AlignGraph, then both the sensitivity and precision measures of the ALLPATHS-LGc contigs improve compared with the assembly without a reference.

A detailed inspection of the REAPR results suggests that the fish genome is highly repetitive, with many collapsed repeats called, compared with the assemblies of snake and bird.

As a whole, the IIa/III/I region of BoLA is shifted ~3900 Kb telomeric in the Btau_4.0 assembly compared with the Btau_3.1 assembly.

More reads aligned to intergenic sequence in the tammar assembly (79%) compared with the opossum assembly (41%).

The resulting individual transcript assemblies were compared with the reference assembly using Cuffcompare [ 22] to identify novel transcripts.

Comparing with the previously released A. mediterranei S699 assembly [ 32], which was assembled using A. mediterranei U32 as a reference, the genome we sequenced contained a 10-kb insertion.

Functional analyses revealed that all three tissue types showed equivalent significant functional enrichment when compared with the pooled assembly.

Regarding the accuracy of the integrated map, we do see some conflicts in marker order when compared with the sequence assembly (see, for example, Additional file 4).