Sentence examples for compared to the read from inspiring English sources
Intron retention was the most prevalent AS event under salt stress, although most intron retentions had relatively low read coverage compared to the read coverage of exons.
Candidate genes for alternative splicing were identified by a significant read coverage within intron sequences as compared to the read coverage of the surrounding exons.
Alternative splice sites were required to be supported by a read number of at least 25% uniquely mapped reads compared to the read number of the surrounding exons.
Cummulative read length distributions of all reads mapping to the 3′ UTR of the 19 genes with 3′ ribosome density identified compared to the read length distributions of reads mapping to all CDSs in the late trophozoite stage (black line).
For example, the read counts of miR-21* in the non-pregnant and pregnant libraries were 81 and 179, compared to the read counts of 43703 and 138637 for miR-21, respectively.
We found that the pattern of coverage variation was strikingly similar for read and fragment coverage in our data (Additional file 1: Figure S3), the only qualitative difference being a slightly higher overall coverage for the fragment counts compared to the read counts.
The putative transcript sequences were compared to the reads mapped to the genome, visualized with IGV version 2.0 (http://www.broadinstitute.org/igv/), and improved where possible.
It has been reported that the longer Roche 454 reads as compared to the Illumina reads, results in an improvement in mapping of repetitive regions [ 32].
With the capillary technology, each read is large compared to the NG reads.
