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Results showed that community divergence at landscape scale occurred following the typhoon.
Bacterial community divergence in the mesocosms was quantified using a Euclidean-based divergence metric.
CLPP-related indices such as substrate richness, substrate diversity, over-all community profile, and community divergence are also presented.
All mesocosms showed a sharp increase in community divergence until day 75, at which point a steady state was reached.
In addition, the CORE database and phylogenetic tree provide a framework for measures of community divergence, and the focused size of the database offers advantages of efficiency for BLAST searching of large datasets.
In addition, the resulting phylogenetic tree provides a framework for further comparative research in health and disease-associated bacterial communities with measures of community divergence such as UNIFRAC [12].
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With an exploratory modelling strategy for complex integrated systems, our purpose is to assess relative impacts of policy interventions by measuring the long-term landscape and community divergences (compared with a baseline) driven from the widest plausible range of options for a given policy.
This hypothesis has been questioned with several observations of increasing microbial community divergences with increasing geographic distances, hence suggesting a microbial provincialism (reviewed in [7], [8]).
Correlations between microbial community evolutionary divergence and temperature and pH invited deeper exploration of the extensive physical and geochemical data available for some of these metagenomes, in particular a subset of twenty-two metagenomesequenceded as part of several studies of YNP hydrothermal ecosystems (Additional file 2: Table S2) [ 24, 27- 29, 25].
The neutral model was used to identify whether the community structure shows divergence, convergence or neutrality.
While overstory retention harvests provide habitat for a diverse and abundant bird community, the temporal divergence in avian community composition that we observed between treatment and control stands reveals the importance of uncut, mature red pine forest as a component of a biodiverse landscape.
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