uses a visual modelling interface because we believe that provides the best way for building, analysing and communicating models.
According to Muetzelfeldt & Massheder (2003) SIMILE software: uses a visual modelling interface because we believe that provides the best way for building, analysing and communicating models.
We therefore suggest augmenting the current culture of communicating models as working just fine with a culture of presenting analyses in which we try to break models, i.e., model mechanisms explaining certain observations break down.
Communicating modeling and simulation can often be difficult, especially when trying to describe the impact of assumptions and uncertainty to people not used to working with prediction models or translational aspects, or both.
Driven by the introduction of the Systems Biology Markup Language [ 1], an XML-based language for communicating models between different tools, a large number of software packages now exist that simulate networks of interacting genes and proteins [ 2].
In this article, we first illustrate how PMP provides structural information for proteins by combining experimental structures in the PDB and theoretical models from various modeling resources, and explain how PMP communicates model quality information.
We identified common limitations across all Use Cases, namely 1) a scarcity of data for developing, evaluating, and applying agricultural system models and 2) inadequate knowledge systems that effectively communicate model results to society.
For model developers, it provides a simple means to register, upload and communicate models, making the models uniquely citable and the supplementary material of scientific publications interactive.
We have focused on the steps that help understanding and communicating the model, including the exploration of alternatives as well as interpretation and communication.
When communicating the model with others over the network and transferring attention back and forth between discussion with other people and observation of his/her own 3D models, the user must periodically share the perspective and focus with the other collaborators in order to ensure consensus in their decisions.
