Sentence examples for common reference sequence from inspiring English sources

Such polymorphisms are called single feature polymorphisms (SFPs) because they differ from a common reference sequence.

In many cases several of these could be associated with a common reference sequence using blast to query a reference database.

With actively ongoing projects and the consequential updates of the reference sequences of bread wheat and barley, data need to be mapped to a common reference sequence to compare previous results against current ones.

This enables browsers to display the most recent data about a region of interest, as DAS makes use of the common reference sequence as a basis to visualize additional annotation.

It is noteworthy that recording of all variants was not conducted by comparison with a common reference sequence, such as the rCRS (revised Cambridge Reference Sequence), but rather by comparing the premutation node with the branch in which that mutation occurred.

In particular, groups of reads have common matching reference sequences.

The amino acid alignment used the ClustalW2 alignment method driven by the Seaview version 4 program to select the reads having at least 100 amino acids in common with this reference sequence.

A MR (matching region) is a common substring between the reference sequence and the read.

Thus among 39 isolates from cattle that were not associated with buffalo only 5 Tp2 alleles were observed (with allele 1 from the Muguga reference sequence the most common, being present in 24 of the 39 isolates (61.5%)), while among 41 isolates or clones of likely buffalo origin there were 38 alleles (Table S1).

Mapping reads to a reference sequence is a common step when analyzing allele effects in high-throughput sequencing data.

DAS facilitates the display of distributed data sources in a common framework with respect to a reference sequence.