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Aptitude is a command tool and offers a TUI interface.
The dpkg command tool does not know about repositories.
The BAM file needs to be sorted and indexed using the SAMTools command tool.
Command tool functionality for Enrichment Map requires the given task to define its variables as tunables.
The BuildEnrichmentMapTaskFactory is used by both the user interface and command tool to construct an enrichment map.
There are two main ways to input data into Enrichment Map, through the user interface or the command tool (Table 1).
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and are command tools of the standard apt package.
Some computer scientists turn to voice-command tools to avoid the pain of typing.
In the present implementation, we introduce a set of commands, tools, in order to perform all these tasks.
In the case of a command line tool, instead of copying the tool code, you just add a reference to the tool binary in the Chipster configuration file.
As such, GiA Roots is comprised of two tools: a GUI and a command line tool.
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