Sentence examples for combinations of genome from inspiring English sources

The size of the accessory and core genomes for different numbers and combinations of genome comparisons was calculated from the genome alignment.

The segmented nature of rotavirus genomes enables reassortment events in which novel rotavirus strains are produced with new combinations of genome segments derived from parental virus strains (3 ).

Specifically, sets of P450s from each genome were reciprocally blasted [ 32] in all combinations of genome pairs using BlastP program with an E value cutoff of 1E-50.

This process generates hybrid progeny with novel combinations of genome components inherited from different parental viruses and may lead to the emergence of highly virulent strains (Hou and Gilbertson 1996; Pita et al. 2001; Gu et al. 2007; Chakraborty et al. 2008; Nelson et al. 2008; Chen et al. 2009) or facilitate adaptation to alternative hosts (Idris et al. 2008; Ince et al. 2013).

Given that reassortment generates novel combinations of genome components derived from different species or strains, the diversity of combinations that are observed in a population (hereafter referred to as genome constellation diversity) can provide an indication of the frequency of past reassortment events (Dugan et al. 2008).

We have recently used combinations of genome-wide ChIP and DamID data to generate high confidence in vivo binding profiles and define a set of core binding intervals for both Dichaete and SoxN in Drosophila melanogaster.

For example, we used combinations of genome-wide genetic variants to proxy BMI and height, but these variants may not be specific for BMI or height and may influence prostate cancer through biological pathways other than through the phenotypes that they are acting as proxies for (genetic confounding or pleiotropy).

All possible combinations of genomes from 1 to M (the maximal number of available genomes) were calculated.

The recombinant pool would have started with all combinations of genomes, some with left end promoters A1-A3 present, others with those absent, and similarly for Plac.

Orthologs shared between species were identified with amino acid sequence searches between all pair-wise combinations of genomes using USEARCH [ 34].

For each number of organisms considered (2 27 for Listeria sensu lato, 2 10 for Listeria sensu strictu), the inferred sizes of core and accessory genomes were recorded for 10,000 replicates of randomly selected combinations of genomes.