When we coexpressed synaptophysin-GFP and PSD95-RFP puncta of the two proteins were sometimes colocalized but assembled and disassembled separately, with all possible combinations of assembly and disassembly of the two types of puncta occurring at individual sites (Fig. 6A,C).
Although we used the Trans-ABySS pipeline for the assemblies and alignments in our experiments below, Barnacle can be applied to the outputs of a variety of combinations of assembly and alignment tools, provided that the outputs can be converted to the accepted formats.
As we watch the combination of assembly-line production and artisanship that produces the chair, the employees' observations fine-tune our appreciation of sundry details.
For each combination of assembly parameter values the length of the longest sequence was determined and annotated against homologues in A. thaliana.
Therefore, a combination of assembly and sequence similarity methods were utilized to identify transposable elements (TEs) and other repetitive sequences (Table 2, Additional files 2 & 3).
This pipeline uses a combination of assembly methods, which has been shown to produce assemblies that are superior to any single method, resulting in fewer contigs with shorter cumulative length [ 40].
It is also possible that the bkbwg region is contiguous and the region in question actually belongs in a different region of the genome but has been placed here by a combination of assembly and mapping errors.
Experiments were designed with various combinations of electrode assemblies, surface area of anode and anodic materials.
In the assembly level, we check all combinations of the assembly and get a set of candidate assembly sequences.
In the assembly level, the system checks all combinations of the assembly sequences and gets a set of candidates.
With P. fastigiatum none of the genes could be assembled completely with all 380 combinations of the assembly parameters.
