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These toolsets integrates computational methods to predict the gene functions based on a collection of interaction networks.
GeneMANIA is a large collection of interaction networks from several data sources which identify genes and networks that are functionally associated (protein and genetic interactions, pathways, coexpression, colocalization, and protein domain similarity) with the query gene sets.
The significance of the interaction term (or, for variables with more than two categories, the overall significance of the collection of interaction terms) implied how different the effect of the variable was on infection status between the urban and rural women.
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The collection of interactions between cortical and subcortical areas forms a functional brain network whose topology evolves with time.
Frozen soil engineering system is a functional collection of interactions between natural and artificial objects in permafrost regions, which as a scientific logic methodology is established in order to solve frozen soil engineering problem.
A pathway consistency score is calculated as the average likelihood of the logical consistency of the collection of interactions given the calculated states of the genes (see Methods).
> This corresponds to a collection of interactions between drugs and targets from DrugBank (http://www.drugbank.ca/).ca/
An API has also been implemented to calculate the score distribution of a collection of interactions from a database.
(i) Pick a database of functional annotations, say MIPS, and a collection of interactions, say MIPS (again).
In summary, a collection of interactions that were predicted by the crystal structure of the homologous GluClα receptor was examined in the GluClβ receptor.
MEROPS maintains an extensive collection of references (11), known cleavage sites in substrates [including synthetic peptides, as well as proteins (12)] and a collection of interactions between peptidases and inhibitors, both naturally occurring and synthetic (13).
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