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Horvath et al. (2008) found that CBF genes involved in cold regulated were up-regulated during the transition from para- to endo-dormancy [ 5].
The expression pattern of these contigs is distinct to other contigs that are cold regulated.
Among the differentially cold regulated transcripts, 75% showed ecotype specific expression pattern.
The constructed network was able to capture 30 (~50%) of these already reported cold regulated TFs.
The significant list of differentially regulated transcripts includes most of the known cold regulated genes.
All the CBF genes as well as the selected COR genes were cold regulated in 10 ecotypes.
Similar(33)
The protein products of the genes, in turn, regulate the expression of cold-regulated(COR) genes.
In addition, AtHAF2 regulates the expression of several cold-regulated genes independent of its HAT activity [ 19].
AtHAF2 participates in the regulation of some cold-regulated genes [ 19].
These alterations are regulated by a complex multigenic system that revolves around the induced expression of several cold-regulated (COR) genes (Thomashow, 2001).
They found that several cold-regulated (COR) genes all carry the same regulatory sequences--suggesting they are all turned on by the same signal when the mercury drops.
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