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The concept of evolutionary discovery of theme which has been interpreted as a semantically coherent topic or subtopic transition appears within [82].
Later, Cao et al. [6] and Zhao et al. [7] both present spatially coherent topic models to encode the spatial relationship of image patches which is ignored by the traditional topic models.
The eLife staff suggested that we create three appendices, each with one coherent topic or set of contents.
As a result, each coherent topic is described by its top constituent words to give a quick overview of the contents and is annotated with the genes most strongly associated with it.
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Topic models are preferred for aspect extraction as coherent topics without requiring any manual support.
However, in that case the model takes longer to converge to coherent topics.
Along with coherent topics, it also tends to find incoherent topics that doesn't make much sense, however, it shows better results for large datasets.
To promote knowledge around coherent topics, educational research should be located within a theoretical framework [ 33].
Overall our novel method provides a quick and useful way to analyze any input gene with respect to coherent topics in the literature.
Here we investigated its use for genetics data as well as transcriptomics data, but we expect it to work equally well in other settings, if coherent topics for the genes exist in the literature.
To love the Fall is to love something that you can never explain, since there is rarely anything as coherent as a topic in a Fall song.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com