Exact(1)
For transcripts with shared expression, a Pearson's correlation coefficient of read counts was calculated between tissues to identify how broadly similar expression was between liver and gill among the set of common active genes.
Similar(59)
Other metrics we considered were never fully consistent: coefficient of variation of read count and percentages of annotated sequences that also had reciprocal best hits.
The trinomial coefficient defining the multiplicity of read counts and a term involving errors are ignored, as both remain constant in interpopulation comparisons and hence have no influence on the following statistical test.
The results in specification NL4 show that the focus on grades with LEP students has a slight decrease in the magnitude of the coefficient for reading to −0.075 (only significant at the ten percent level), whereas the magnitude of the effect for mathematics increases to −0.14 (now significant at the one-percent level).
The other method (called "classical analysis") consists of the calculation of expression ratios, standard deviation, and coefficient of variance from read counts normalized to the total number of read counts for the sample, similar to what was described previously for microarray analyses [ 10].
The average correlation coefficient of mRNA normalized read counts between samples at each time point was 0.95 for control samples and 0.92 for infected samples, indicating very high reproducibility of the data among replicates (Table S4).
When including only orthologous pairs where both members had a minimum number of reads, the correlation coefficient remained quite stable.
We calculated the global coefficient of correlation between the densities of reads in introns and exons of each annotated gene in each sample.
The 81 LSBs of the DC coefficients are read to find the size of the payload and the positions of the AC coefficients which were used for embedding.
The Pearson's correlation coefficient between the read counts of the three populations before stress treatment (total six libraries 3 from S0 and three from C0) ranged from 0.94 to 0.99 and the correlation coefficient between the three populations of control plants at the end of the experiment (C1) ranged from 0.93 to 0.95.
The coefficient of determination R2 reads only 0.0093, presenting a low degree of explanation.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com