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My PhD looked at the development of story telling by primary school children, focusing on participant identification and conjunction – and undertaking a statistically based semantic variation analysis of their different coding orientations at ages 6/7, 8/9 and 10/11 (Martin 1983).
Region A and B had opposing coding orientations.
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Another characteristic of the photographs is that they usually have a naturalistic coding orientation, that is, they show clear details, with a reasonably full spectrum of colour and shading, etc. (see Royce 1998).
Read-through fusion transcripts that result from the splicing of two adjacent genes in the same coding orientation are a recently discovered type of chimeric RNA.
This repetitive BLAST process was continued such that the seed sequence was extended 25 kb in both the 5' and 3' direction relative to the coding orientation of the seed.
Unlike DUS and H. influenzae USSs, most A. pleuropneumoniae USSs in coding regions are in the coding orientation, showing that USS orientation with respect to transcription and translation is not itself an important factor.
Like the other uptake sequences, A. pleuropneumoniae uptake sequences in coding regions exhibit a strong reading frame bias, with almost half in frame three in the coding orientation (table 2).
One particularly prevalent class of chimeric RNAs involves adjacent genes in the same coding orientation that are spliced together to form an in-frame chimeric transcript that spans both genes.
The newly identified Drosophila Runx gene sequences (CG1379 and CG15455) are present in a single sequence file (see Supplemental Table 1) and with opposite coding orientation and were named for this study RunxA (CG1379) and RunxB (CG15455).
Other formal systems include selection systems, policies and codes, orientation and training programs, performance management systems, authority structures, and formal decision processes.
Therefore, BLAST results were limited to only remove hits in the sense (protein-coding) orientation.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com