Exact(13)
For this purpose, the concept of coarse database is introduced, according to which smaller-size versions of an appropriately ordered large database can be constructed.
First, the query is searched against the coarse database.
The coarse database essentially represents only the unique data from the original database.
For every pointer corresponding to that k -mer in the seed table, follow it to a subsequence in the coarse database.
An index file is also produced, which maps the sequence identifiers from the coarse database to entries in the compressed database.
If a resulting subsequence in the coarse database further matches the window by the additional residues, then attempt extension (see below).
Similar(46)
The first optimization stages of the resulting multi-database cascade procedure make use of the coarsest database versions available and serve the purpose of basic design space exploration.
The nutrition supplies, which affect the plant production, were lower in the coarser STATSGO database than in SSURGO.
A growing number of these simulation results are being made available online, in the Coarse-Grained database (CGDB, http://sbcb.bioch.ox.ac.uk/cgdb/).ac.uk/cgdb/
Database on coarse wood decomposition rates obtained from [25].
This database uses a coarse grid size of 8 × 8 km of land to calculate rainfall and NDVI values for each group ranch-monitoring site.
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