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Clusters were delineated with a cutoff of P < 0.01 for each voxel and P <0.01 for each cluster with a minimal cluster size of 21.
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These clusters are delineated in a representative simplified phylogenetic tree for the PtbK tail tube protein (fig. 4; full version in supplementary file S3 A, Supplementary Material online).
As in the former studies, three lineages, Nitrosomonas sp. Nm143 (cluster 143), Nitrosomonas oligotropha (cluster 6a), and Nitrosomonas marina (cluster 6b) were delineated in the current phylogeny (Purkhold et al. 2003; Dang et al. 2010).
> Amino acid sequences were delineated into clusters with putative shared homology using the Markov clustering (MCL) algorithm (van Dongen 2000) as implemented in the MCLBlastLINE pipeline (available at http://micans.org/mcl, last accessed March 20 , 2014.
Thirty seven clusters of epidemiologically linked premises were delineated using an interpolated surface of date of onset of clinical signs, geographic data and location of infected premises.
Genes for all three strains were delineated into homologous clusters using the MCL algorithm [ 48] as implemented in the MCLBLASTLINE pipeline (available at http://micans.org/mcl).org/mcl
Four groups of DEGs with specific expression patterns were delineated from the clustering.
Clusters with >50% probability of having >50% prevalence were delineated in each country.
By unsupervised analysis, three clusters of tumors, one of which presented a substantially worse outcome, were delineated.
Patient outcomes were delineated.
Precise structure activity relationships were delineated.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com