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In the present study we aimed to infer how a parasite can influence host gene regulation by looking at host gene profile and expression and interpreting the basis of molecular determinants by pinpointing host gene clusters, processes and mechanisms of defense and co-existence with the parasite.
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In addition, their average in ten clustering processes is required.
As a matter of fact, HEED triggers more clustering processes than BP.
Specific clustering processes need to be identified to account for this.
First, we inferred gene functions based on statistical genetic interactions, predicted protein complexes and clustered processes by similarity.
Poisson cluster process.
Algorithm 1 Initiating clustering process.
To model the clustered networks Mattĕrn cluster process (MCP) and Thomas cluster process (TCP) is used.
Algorithm 3, shows the final stage of the clustering process.
For the clustering process the following algorithm was used.
Section 4 describes the clustering process and the protocol structure.
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