Sentence examples for clusters of reads from inspiring English sources

The barcoded reads from the 10x Genomics library were mapped to the assembled scaffolds, and clusters of reads with the same barcode mapped to adjacent contigs in the scaffolds were identified as being part of a single long molecule.

A recent transcriptome profiling study also found many clusters of reads that mapped to unannotated regions of the Ae. aegypti genome [44] suggesting empirical validation of transcribed units using next-generation sequencing should be used to complement in silico gene prediction pipelines.

Search space construction : generate clusters of reads using the taxa of their hits.

First, taxonomic information shared by reads at that rank is used for characterizing clusters of reads having the same taxon.

MTR generates a collection of clusters of reads, where each cluster is associated to a taxon at the considered rank.

Furthermore, reads clusters from Rhizophagus genomes have higher average PID than clusters of reads from control fungi (table 1).

These were then grouped into clusters of read pairs that were consistent with the same rearrangement junction: a minimum of two consistent reads were required.

Clusters of read pairs mapping to the same genomic regions, whose distance is much shorter (longer) than expected can be explained by an insertion (deletion) in the newly sequenced individual compared to the reference genome.

Clusters of reads in the L. donovani library are listed in descending order of abundance, with the homologous cluster of reads in the L. braziliensis library given in the same row.

This last variable quantifies similarities between sequences within a cluster of reads.

The cluster of reads used for mutation analysis can be accessed from: http://www.ibp.cz/local/data/matyasek/.