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Forty clusters, defined as primary schools in Jakarta, and 15 2nd- and 3rd-grade children in each cluster were randomly selected for participation in the study.
A total of 81 trans-eQTL clusters, defined as 10 or more co-localising trans-eQTLs, were identified across all four tissues (Table S3).
For every genome in IMG, genes are associated with various protein clusters, including COG [15], Pfam [16] and IMG ortholog clusters, defined as bidirectional best hits of genes to other genomes clustered using the Markov Clustering (MCL) algorithm [17].
The eBURST analysis based on allele profiles in the nine housekeeping genes and two virulence genes in the 143 independent isolates identified eight clusters defined as a set of STs and 13 singletons (Figure 2).
The study area was divided into 212 clusters, defined as the catchment area of 1 4 VHWs.
The 3 temporal lobe regions examined above were based on clusters defined as having repetition effects collapsed across LAG.
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Silhouette score is a measure to quantify the goodness of data clustering, defined as the average silhouette calculated over all cluster elements.
In the SVM scoring step, the score of each cluster, defined as its ability to differentiate the two classes of samples by applying linear SVM, was obtained.
The rate ratio of the spatial cluster defined as the risk of an individual within the cluster having an infection compared to those outside was highest in 2006 (RR = 297.9) and lowest in 1999 (RR = 2.1).
Once the base layer is identified, we compute the aspect ratio (AR) of the cluster, defined as the ratio of the depth to the spread of the base layer (Fig. 2D).
A cluster randomized trial design was used, with a cluster defined as a community with at least one chemical shop.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com