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If the feature does not require additional clustering, proceed to cluster merging. .
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Clustering proceeded as per the USEARCH manual by clustering at a distance of 3% and using representative sequences from each cluster to cluster again at 5%.
Pairwise clustering proceeded based on a conceptual phylogenetic tree of the involved plant species (Additional file 2: Figure S1; Additional file 3: File S2, script P0_HieraProcedure.txt).txt
After the stage of nucleation, the growth of Au clusters proceeds mainly in the lateral direction.
We will discuss each of these clusters, proceeding from the 5' to the 3' end of the gene.
The splitting method provides a finite set of cluster proceeding as follows.
Furthermore, because clustering proceeds irrespective of the species-of-origin, the resulting assignments represent an objective measure of the number of genes in each family, for each species.
Clustering proceeds by re-assigning each node in turn until clusters stabilize.
Hierarchical clustering proceeds by agglomerating into clusters points that are similar to each other or similar to a previously found group of points.
As a result, signaling induced in the absence of significant receptor clustering is blocked at the level of Erk, JNK, Akt, and NFAT, while signaling induced by high-valency receptor clustering proceeds through these pathways.
Spectral clustering proceeds by envisioning this information as a similarity graph (see Supporting Information for a definition) in which each superpixel of the image is a node, and the similarity of the regions is the weight of the edge connecting them.
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