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The fuzzy c-means clustering of selected covariates led to the delimitation of soil-landscape units.
Fig. 3 Dendrogram showing the spatial clustering of selected heavy metals in water samples from Muledane boreholes during the monitoring periods based on the hierarchical cluster analysis using Ward's method.
We found that the candidate genes of recent positive selection localized significantly closer to each other on the PPI network than expected, revealing substantial clustering of selected genes.
It may be possible that the observed clustering of selected sites is related to this hypothesis, which might suggest regions of conservation where interactions occur.
The simulation protocol described by Grant et al. [ 67] was used to test for clustering of selected differentially expressed candidate genes on chromosomes.
It would be reasonable to assume that this clustering of selected sites is because mutations would either be compensatory or in a region of decreased conservation.
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This provided a cluster of selected trees containing approximately 15 trees per plot on average.
In the Nundle 1977 AC stand, all of the 54 plots were used (ranging from 12.62 m to 19.95 m in radius), providing a cluster of selected trees containing approximately 22 trees per plot on average.
In the Nundle 2002 AC stand, 52 of the plots were used (ranging from 7.98 m to 17.84 m in radius), providing a cluster of selected trees containing approximately 23 trees per plot on average (two plots were inaccessible).
In the Green Hills inventory survey, plot measurements and tree assessments were undertaken by an independent local inventory crew using ATLAS Cruiser methodology (Atlas Technology, Rotorua, NZ) which provided a cluster of selected trees containing approximately 18 trees per plot on average.
Pathway analysis and biological process association were mapped using PANTHER-Expression data analysis [41], [42], a conceptually simple binomial test to compare classifications of multiple clusters of selected list with a reference list (NCBI: Homo sapiens Genes) to statistically determine over- or under- representation of PANTHER classification categories.
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