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The outcome of their study is a clustering of already clustered individuals, rather than of a random sample, thus overstating the continental clustering.
In contrast, STRUCTURE analysis of the nuclear data clustered individuals into groups that strongly align with mtDNA clades (Fig. 2).
To assess whether population structure based on saliva microbiome diversity exists among the KhoeSan, we clustered individuals based on their phylum-, genus-, or species-level relative abundances.
Bayesian cluster analysis clustered individuals from East Asia together with Native American or Colombian individuals, indicating their close phylogenetic relationship [ 44].
In this paper, we present a description of the current genetic structure of the species, genetic differentiation between populations and kinship within clustered individuals based on microsatellite markers.
Further, a computationally more efficient and powerful compressed MLM (CMLM) that uses a group kinship matrix calculated from clustered individuals was developed recently [ 17].
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Clustering individuals were also 3.5 years younger than non-clustering individuals (p < 0.001).
A novel statistical procedure for clustering individuals characterized by sparse-specific profiles is introduced in the context of data summarized in sparse contingency tables.
The optimal number of groups (i.e., K) for clustering individuals was tested for K = 1 to K = 15, using changes in log-likelihood values between Ks46, running ten independent replicates with 10,000 iterations each.
(i) Clustering individuals from an outcrossing species into putative populations (represented approximately as panmictic populations).
However, results of clustering individuals of TH-tr and TH-sa were not significant.
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