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As described recently, Dre2 is an essential Fe/S cluster protein, containing both [2Fe-2S] and [4Fe-4S] clusters and involved in Fe/S cluster biogenesis [22].
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The gene clustering using MapMan software shows that the cluster "Protein" contains the largest fraction of differentially expressed genes.
In the case of a surface consisting of size-selected atomic gold clusters, proteins containing free cysteine residues can chemisorb directly to the bare cluster surface, thus effecting oriented immobilisation.
They are cytochrome b (SU3) containing heme b H and heme b L, cytochrome c 1 (SU4) containing heme c 1, and ISP (SU5, Rieske protein, iron-sulfer cluster binding protein) containing one [2Fe-2S] cluster.
A number of techniques were used to identify TOMM biosynthetic gene clusters from the D protein containing gene clusters.
The deduced amino acid sequence (413 residues) is that of a protein containing seven clusters of hydrophobic amino acids suggestive of membrane-spanning domains.
To satisfy the principles of parsimony, we grouped into clusters the proteins containing similar peptides not differentiable by MS/MS analysis alone, correcting channels as described in i-Tracker [ 91].
To obtain further insights into the possible function of the AMIN domain, we first clustered the proteins containing this domain into distinct families using the BLASTCLUST program and serial threshold cutoffs.
Although not connected to the above-mentioned clusters, a protein cluster containing components of the translocase inner membrane complex (CAST cluster 13) associated with carrier proteins (CAST cluster 94), was retrieved as well.
Consensus topology predictions indicated that the four Mas1B orthologs and three Cluster IIB proteins contained two N-terminal transmembrane helices (oriented in-out, out-in).
We show that naturally occurring binding sites for the Ubx-encoded protein contain clusters of multiple individual binding site sequences.
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