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Each cluster is accessed by a serial ID, and each cluster entry contains the list of gene IDs.
For example, clicking the cluster entry in the browser table will select all nodes within a cluster.
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However, as non-mesh STA3 is in another cluster, no entry is found.
The InterPro entries among the TOP 100 with the lowest values on PC1, thus most abundant in Pezizomycotina in comparison to Saccharomycotina, overlap with cluster InterPro entry enrichment of A: "Pezizomycotina abundant" and B: "Pezizomycotina specific" clusters (Tables 2 and 3).
In sc-PDB, a mean point is a representative of a cluster containing entries of a protein bound with different ligands.
In a perfect clustering, all entries would be equal to 0 or 1 in the consensus matrix and ρ k C ¯ = 1.
Each cluster's InterPro entry structure was defined as the most common InterPro entry structure found in its member proteins.
Every time that a border node receives (or simply overhears) a frame from a peer of another cluster, a new entry containing the address of that peer and its cluster ID is added to this table, if it is not there yet.
The percentage of 4n cells at the final time point roughly equals the number of cells with their centromeres released from the cluster, indicative of entry into the meiotic program (Fig 4A).
The molecular networks are either (combinations of) functional molecular networks (in which function between entries is the main "glue" between molecules) or structural molecular networks (those networks which cluster around certain entries, such as APP or UBC, primarily through experimentally proven physical interactions between the (predicted) proteins.
Yet, in a way, the most significant thing was the cluster of brilliant entries – from 32 countries – that came so close to winning too.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com