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Here, we present a comparative analysis of the antigenicity profiles of cleaved and uncleaved gp140 trimers derived from the KNH1144 (subtype A) virus that are otherwise closely sequence-matched.
The model plant A. thaliana may also be used to study the function of genes that are most closely sequence-related to potato positional candidate genes.
Amplified sequences closely corresponded (sequence identity over 90%) to assayed genes from other mammalian species according to Blast results (Table 5).
In many organisms, these spacer sequences closely match sequences of bacteriophages (bacterial viruses) infecting this or closely related organisms [ 5- 7].
The MakeTable5 program also eliminates redundancies, closely similar sequences and fragmentary sequences.
We BLAST searched the sequences obtained for closely related sequences in GenBank (http://blast.ncbi.nlm.nih.gov/Blast.cgi).nih.gov/Blast.cgi
Later, closely related sequence was obtained from the National Center for Biotechnology Information (NCBI) database.
The next most closely related sequence of gltA, with 96% similarity, was R. felis.
This contention implies that the t haplotype, or a closely related sequence, is the ancestral precursor of the j haplotype.
Analysis of closely related sequence reads identified 123 reads that differed from other reads at only one position.
The BLAST protein searches used the Entrez protein graphical viewer BLink [ 79] to identify closely related sequence neighbors.
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