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There is too much of everything: the tower of books and correspondence, the crowds of friends and lovers, the recollections by virtually any person who could claim a connection, close or remote or simply imagined.
Another important requirement is to retrieve proteins, whether they are either close or remote homologs.
The motivation for augmenting a GOGeneGraph is that co-annotation by a pair of GO terms, whether semantically close or remote, is generally biologically meaningful.
The trends in the close or remote positioning between genomic features may indicate their coordinated action in chromatin packing, recombination, replication, or transcription.
The methylation differences observed may be a result of either inheritance of the epigenetic changes independently of genetic changes, or result from sequence differences which secondarily affect methylation at close or remote loci.
Next, homologs of the query sequence(s) are identified in the gene catalog based on the resulting alignments and user-specified thresholds, which give the user flexibility to target either close or remote homologs of the query sequence in the gene catalog.
Similar(54)
We propose an N-glycan distribution covering two opposite sides of the molecule, occurring either in the close proximity or remote of the active site area.
For example, retrieving proteins that are similar, whether they are close homologs or remote homologs.
It is clear that the structural analysis would benefit from taking into account the structure of the whole protein, but this information is not yet available for the proteins in our dataset or for their homologs, neither close nor remote.
When myxothiazol is used, the FeS head domain is seen in positions different from that seen in crystals with stigmatellin, close or more remote from the Qo site (3, 19).
Cytopathology assistance can be on-site, at a close proximal location, or remote (telepathology) assistance.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com