Sentence examples for clip to identify from inspiring English sources

Here, we use CLIP to identify RNA targets for the shuttling SR protein, SF2/ASF, in order to test the hypothesis that this SR family protein member regulates nuclear and cytoplasmic expression of specific mRNAs in living cells.

We next performed Photoactivatable-Ribonucleoside-Enhanced Crosslinking and Immunoprecipitation (PAR-CLIP) to identify the targets of WTAP and METTL3 proteins.

We employed HITS-CLIP to identify which miRNAs participate in liver regeneration, and to identify their target mRNAs.

Here, we employed Argonaute HITS-CLIP to identify miRNA targets in the bovine retina, an animal model used extensively in vision research.

Moreover, the use of HITS-CLIP to identify novel exons that function in regulating transcript levels is a clever application of an already powerful genome-wide approach.

Here we used PAR-CLIP to identify thousands of binding sites of RBM10 and observed significant RBM10 RNA interactions in the vicinity of splice sites.

For example, Chi et al. [ 56] developed a technique, known as high-throughput sequencing of RNA isolated by crosslinking immunoprecipitation (HITS-CLIP), to identify direct miRNA targets.

Here, we have used the predictive power of HITS-CLIP to identify seemingly irrelevant intronic NOVA binding sites on transcripts showing unexplained NOVA-dependent steady-state changes to predict the presence of cryptic alternative NMD exons.

Adult zebrafish at 3 months were fin clipped to identify the genotype as previously described (39).

Our method resembles CREST (Wang et al., 2011) and ClipCrop (Suzuki et al., 2011), both of which use soft-clipping to identify genomic structural variations.

After reimplantation of the manipulated embryos, pups were screened for the presence of the transgene by PCR analyses of genomic DNA from tail clips to identify those harboring the transgene DNA.