Sentence examples for clip sequences are from inspiring English sources

Again, all the eight nucleotidesof binding sites in CLIP sequences are significantly more single-stranded).

Matching short soft clips: Short soft clip sequences are used to try to find reciprocal support for the remaining unpaired clusters by directly searching the cluster anchor region using short soft clip sequences derived from the re-aligned locus.

The soft clipped sequences are then extracted and re-aligned to the reference genome.

To better understand the nature of HIV-1 Gag RNA interactions, the technique of crosslinking immunoprecipitation (CLIP) sequencing was used (Box 2).

After quality clipping, sequences were assembled based on overlaps using the GAP4 module of the Staden Sequence Analysis Package as described previously [ 57].

Since optimal ab initio assembly parameters could not be defined, the clipped sequences were assembled by MIRA with 279 iterative changes of the hss/bph parameter set for each of the 96 BAC data sets, resulting in 26,784 assemblies.

The clipped EST sequences were submitted to the Genbank nucleotide sequence database with accession numbers EW739703– EW739703[ 64].

While predominantly filmed in Lake Placid, New York, in October 2011, the clip's opening sequences were shot at the State University of New York at Plattsburgh.

Prior to assembly the sequence reads were screened for the Sfi-linker that was used for concatenation, the linker sequences were clipped out of the reads and the clipped reads assembled to individual transcripts using the Newbler software version 2.6 at default settings (build: 20110517_1502).

Prior to assembly, the zorapteran sequence reads were screened for the Sfi-linker that was used for concatenation, the linker sequences were clipped out of the reads and the clipped reads assembled to individual transcripts using the Roche/454 Newbler software at default settings (454 Life Sciences Corporation, Software Release: 2.5.3 [2.5.32.5.312.5.3

Remaining sequences were clipped at 180 bp, translated into amino acid sequence, and sequences having in-frame stop codon(s) were removed.