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We take the CLIP data as ground truth and that is not completely correct because the CLIP data itself has false positive examples.
Researchers' triadic analysis of a collaboratively chosen video clip data to create dialogue commentary, brought together multiple perspectives on what was being studied, and highlighted throughout this paper.
Video clip data interpretations and discussions (including screen capture snapshots), acknowledged researchers' different perspectives in relation to babies' room activity and pedagogical practices in LDC site.
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It contains complete annotation of the CLIP data.
Because miR-21 has been found to directly target the 3' UTR of PDCD4 human tissues [34], immunoprecipitated RNA from SAEC cells over-expressing miR-21 served as a positive control for CLIP (data not shown).
Similar(33)
Current error correction approaches could be improved so that they would be applicable not only to NGS data generated with 'pure' CLIP protocols but also to PAR-CLIP data with T C mutations.
SF, JM, MJ performed PAR-CLIP data analysis.
WavClusteR 61 is a computational tool proposed to overcome two problems in PAR-CLIP data processing.
HITS-CLIP data have been deposited in GEO under accession number GSE47794.
GO analyses of DEGs and PAR-CLIP data were performed using DAVID.
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