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There were three types of revised classifications (Supplementary Table S3).
Due to the large amount of missing data on certainty classifications (Supplementary Note 2), trends arising from data on the certainty classifications are likely to be misleading.
Furthermore, we also found that increased expression of PDCD4 showed better prognosis in NPC patients, regardless of disease stage, T, N and M classifications (Supplementary Figures S2A F).
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Therefore, we first performed a sequence-similarity-based clustering analysis of all retrieved putative EGF ligands, with the aim of supporting our domain-based classification (Supplementary Figure 4).
Furthermore, application of this gene length bias correction to all data sets did not affect cell type classification (Supplementary Fig. S5).
We segmented the RdRP dimers from all the tetramer dataset and performed 2D classification (Supplementary Fig. S3) and 3D refinement.
Similar results were seen with the motif-alone classification (supplementary material Fig. S5).
There was no difference in amino acid exposure classification (Supplementary Material, Tables S3 and S5) or CPSC (Supplementary Material, Table S4) between GMEPS and VHL disease mutations.
Thus, the distribution of damage in the temporal lobe was a key predictor of aphasia classification (Supplementary material and Supplementary Tables 1 and 2).
The use of parsimony also leads to qualitatively similar conclusions; however, worm and chicken change their BDS classification (supplementary fig. S3, Supplementary Material online).
Among the radish predicted genes, 21,828 showed similarities to protein-encoding sequences in NCBI's KOG database with functional classification (Supplementary Table S9).
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