Sentence examples for classifications of lists from inspiring English sources

Analysis of PANTHER over-represented functional categories and pathways was performed using the "Compare Classifications of Lists" tool available at the PANTHER classification system website.

Functional classification of gene lists has been performed for each dataset.

The PANTHER binomial statistics tool to compare classifications of multiple clusters of lists to a reference list of Canis familiaris genes allowed us to statistically determine over-manifestation of PANTHER biological process and pathways classification categories.

Both classifications utilise lists of behaviours to consider in the process of diagnosing hyperactive conditions.

Shown in Table 4 is a summary of these classifications (Entire list of GO_BP terms is found in additional file 3).

We used the PANTHER binomial statistics tool to compare classifications of multiple clusters of gene lists with a reference list (list of all genes in our array) and to statistically determine over- or underrepresentation of PANTHER classification categories.

Pathway analysis and biological process association were mapped using PANTHER-Expression data analysis [41], [42], a conceptually simple binomial test to compare classifications of multiple clusters of selected list with a reference list (NCBI: Homo sapiens Genes) to statistically determine over- or under- representation of PANTHER classification categories.

Table 1 contains an overview of different histopathology classifications and lists the SnoMed codes used in this project to identify individuals with VA and inflammation.

Boulesteix proved that in case of the data matrix scaled to unit variance and two-class classification the lists of genes obtained with ordered squared weight vector w from the first PLS component is of the same order as from F-statistics.

Additional file 4: Comparison between p53retriever classification and lists of published p53 bound regions.

Often, researchers enumerate GO classifications of a microarray-derived gene list selected using a particular p-value or fold-change threshold [40] [42].