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Phenotypic differences between VvTFL1A haplogroups are consistent with the classification of grapevine phenotypic diversity in three different morphotypes proposed by Negrul [ 12] and could result from the use of different genetic pools in grapevine domestication and/or the existence of different selection pressures on the development of table and wine cultivars.
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Altogether, these results are coherent with previous classifications of grapevine phenotypic diversity mainly based on cluster and berry morphotypes as well as with recent results on the structure of genetic diversity in cultivated grapevine.
As expected from our classification of the grapevine DHN sequences based on the presence of various conserved segments, the grapevine DHN1 and DHN4 proteins were grouped together with the YnSKn-type DHNs of Arabidopsis and barley, while the grapevine DHN2 and DHN3 proteins were grouped with the SKn-type DHNs of Arabidopsis and barley.
Each identified cluster was analysed on Babelomics suite to search for significant functional enrichment following a grapevine specific functional classification of 12× V1 predicted transcripts [ 82].
UV-DE transcripts from each cluster as well as density up- and down-regulated transcripts were analysed on Babelomics suite [ 51] to search for significant functional enrichment following a grapevine specific functional classification of 12X V1 predicted transcripts [ 52].
The expression patterns of grapevine DHN1 and DHN2 agree with those predicted by their classification, which suggests that this holds true in the species analyzed here.
Grapevine red blotch is an emerging disease of grapevine found throughout North America.
Tandem duplications of grapevine kinase genes were predicted by determining their physical location on grapevine chromosomes.
Causative Role of Grapevine Red Blotch Virus in Red Blotch Disease.
Enhanced micropropagation and establishment of grapevine rootstock genotypes.
Overall, understanding the expression patterns of the grapevine PK genes might be valuable for improving the stress resistance of grapevine.
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