Sentence examples for classes of nucleotides from inspiring English sources

Homologous sites can be classified in any number of ways, and the genome alignment task usually targets the identification of certain classes of nucleotides.

Although the exact substitution and indel rates we report are sensitive to our choice of threshold, we based our conclusions only on the relative rates in different functional classes of nucleotides which are not biased by the choice of threshold since there is no reason to expect different functional classes to have different rates of sequencing error.

In particular, we focus on population genomic variation across inferred functional classes of nucleotides, chromosomes, and geographic populations.

Estimation of separate substitution rates for classes of nucleotide changes is desirable when base composition is skewed.

The number of positions in genes coding for RNAs is comparable to that of synonymous positions and sequencing errors are expected to occur equally likely at the two classes of nucleotide sites.

Furthermore, since the catalytic asparagine [N] in position 10, while quite conserved in some classes of nucleotide cyclases is substituted by [AILSTYHDE] in many annotated GCs [13], we further modified the motif to [RKS][YFW][GCTH][VIL][FV]X{3}[VIL]X{4}[KR].

The new work now published in BMC Biology by Yuzenkova et al. [ 2] identifies some previously unrecognized mechanisms whereby RNAP discriminates different classes of nucleotide substrates.

Because proportions of different classes of nucleotide substitutions in the C11 + D4 variants and in the human-chimpanzee alignment are not significantly different (χ = 4.42, df = 5, P = 0.49; Table S15), we combined these classes for analysis.

Our findings pleads for the development of mapping software dedicated to the specificities of aDNA reads, combining high rates of particular classes of nucleotide misincorporations at read termini together with short read sizes.

We selected 47 primer pairs that flanked long SSR motifs (criteria mentioned above), gave clear PCR bands in the primary amplification screening and represented in all classes of nucleotide repeats for polymorphism evaluation among 20 different H. brasiliensis clones (Table  3).

A method is described to simultaneously amplify and sequence DNA using a new class of nucleotides containing boron.