Sentence examples for choice of substitution from inspiring English sources

Some of the LC polymers in this series are 'non-crystalline' with strong and narrow glass transitions which are shown to vary as much as 80°C depending on the choice of substitution of the hydroquinone group.

Each MSA program parameterization, such as the choice of substitution matrices and gap opening/extending penalties for example, when available, also strongly affect the final alignment [ 24].

Phylogenetic trees were computed from the resulting alignments using FastTree with default parameters and an automatic choice of substitution model (Price et al. 2009).

As a post hoc exploration of the effects of methods of estimating sequence divergence, including the choice of substitution model and the treatment of rate heterogeneity among branches, we reanalyzed the sequence data used to estimate two of the nrITS rates, for the Winteraceae [ 27] with one of the oldest calibration dates and for Dendroseris [ 28] with a recent calibration.

When trying to find a substitute for a food, try and match the substance of the ingredient to the choice of substitution.

The inclusion of an error margin in BLAST score rankings suggests that the set of MoLFunCs will be relatively stable to isolated changes in the databases due to updates, and to BLAST program versions or choices of substitution matrices that might shuffle the top hits based on their scores/e-values.

In order to check the robustness of the time estimation on the choice of the substitution model, the codon-substitution [21], [22]+Γ5 model was also used.

In order to further check the robustness of the time estimation on the choice of the substitution model, additional analyses based on a more realistic model of codon-substitution [21], [22] were carried out (Tables S5 and S6 with and without the >65 Ma constraint to the Zea/Oryza separation, and Table S7 excluding Poaceae).

As the sequences are highly similar, the choice of the substitution model makes little difference to the distance calculation.

Comparisons of Tables S5 vs 1, Tables S6 vs 2, and Tables S7 vs 3 indicate that the estimated times are very similar between the two models, and that the estimated times are robust to the choice of a substitution model.

In the BI analysis, the model choice of nucleotide substitution was the same as described in ML analysis.