Sentence examples for chip settings from inspiring English sources

MAS5 calculated the present call index for each of the 54,675 probe sets on the chip (settings used were standard for the HG U133 Plus 2 array: alpha1 = 0.04, alpha2 = 0.06, Tau = 0.015, TGT = 500).

Then, we evaluate the impact of BG traffic on the performance of default NST-AODV with the routing metrics considered in Section 7. The radio chip settings for the experiments were those used in the previous section.

However, chip length settings can be adjusted for obtaining different commercial products.

This study tested the same modified forager designed for producing 30-mm chips, under variable chip length settings.

The little CMOS chip stores basic settings for the computer used by the BIOS (basic input/output system) like hardware passwords, date and time information and other configuration settings.

The MEMo chip contains the settings for each test type, controlling the entire process and is specific to that set.

To identify motifs associated with RBf1 and RBf2 targets indicated in Figure S4, the sequences of RBf1 and RBf2 binding regions that associate with TSS/promoter (by HOMER default, −1 kb to +100 bp) were extracted from Drosophila genome R5/dm3 on the UCSC Genome Browser and subjected to de novo motif searching using MEME-ChIP with default settings (Machanick and Bailey 2011).

Firstly, we filtered out all transcripts giving low probe set intensity values on the chip using the default settings of the Agilent analysis software package (values < 100).

The CARPET package [8] Com&Easy function was used with the following settings:parameter set: Principal table, variable p-value cut off for the ChIP-seq peaks; Secondary table, ChIP-chip peaks; Analysis type, common; Coordinate common, Principal Table.

Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.

De novo motif discovery was done within p65 peaks (see Peak Calling) that did not overlap another TF peak or DHS site using MEME-chip with all default settings [ 63].