Sentence examples for checks read from inspiring English sources

We provide a complete bioinformatics pipeline capable of handling raw data from both 454/Roche and Illumina platforms and that performs the necessary quality checks, read filtering, denoising and OTU clustering for further analysis.

The core contributions of this work are: We provide a complete bioinformatics pipeline capable of handling raw data from both 454/Roche and Illumina platforms and that performs the necessary quality checks, read filtering, denoising and OTU clustering for further analysis.

The software FASTQC (http://www.bioinformatics.bbsrc.ac.uk/projects/fastqc/, Last accessed November 16, 2015) was used to check read quality.

We then checked read quality with FastQC - a quality control application for fastq files (http://www.bioinformatics.babraham.ac.uk/projects/index.html).html

Reads that corresponded to flag 1796 in the bam alignment file (flag 1796: read unmapped, not primary alignment, read fail quality check, read is PCR or optical duplicate) were filtered out.

But as cameras flashed and a giant check reading "Pay $65 million to Jim Hall" came their way, the couple's mood lightened.

We excluded the possibility that the recombinants in the homokaryon sample originated from contaminants by checking reads at four protein-coding gene loci listed in Additional file 2: Table S2, where only one parental haplotype was detected at each locus.

As a second quality check, reads from each G. glyphis sample were mapped on the reference mitogenome of the second elasmobranch species included in the Miseq sequencing runs.

Act indifferent as to what the check reads.

Once a bubble has been identified, it is checked for read coherence by checking for coverage from at least two reads.

We then used SOAPsnp package [ 14], which checks the read quality and mapping positions to detect SNPs.