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The reviewers suggested that the interaction of the APA domains of FCHo and SGIP with AP2 be further characterized: We determined that the APA domain binds specifically and directly to both hemicomplexes of the AP2 core.
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As hMSC loading onto gelatin sponges in MG conditions has not previously been characterized, we first determined efficacy of hMSC loading onto the gelatin scaffold under MG conditions. 2 × 10 to 4 × 10 hMSC were introduced to the RWV system along with 1 mm gelatin scaffold.
The mitochondrial genomes of representatives of the three Clades (Fusarium circinatum, F. verticillioides and F. fujikuroi) were characterized and we determined whether or not the mitochondrial genomes of these fungi have value in resolving the higher level evolutionary relationships in the complex.
Since the partial duplications of APBA2 contained the first coding exon and the transcription start site(s) for APBA2 have not been characterized, we sought to determine whether these copies were transcriptionally active.
The structural and mechanistic similarities between BTZ043 and PBTZ169 pointed to similar modes of binding to the active site of DprE1 so, to fully characterize this, we determined the crystal structure of the M. tuberculosis DprE1-PBTZ169 addusingsing the procedure previously reported for the M. smegmatis DprE1-BTZ043 structure (Neres et al, 2012).
We established the maximum score (= sum of the frequencies of the most frequent nucleotides) for the matrix obtained for our motif from the 329 sequences characterized, and then we determined all the sequences with a score of at least 90% of that maximum.
To validate and characterize the simulations, we determined the number of biallelic markers, heterozygosity of biallelic markers, linkage disequilibrium between adjacent markers and coefficient of determination of QTL.
To further characterize the interaction, we determined the crystal structure of 53BP1-BRCT2 in complex with the core DNA-binding domain of P53 and a short "pSQEY" peptide corresponding to the last four residues of γH2AX.
Finally, having characterized the frictional force, we determined the resulting slider trajectory in a specific geometry of the driving and observed an excellent agreement with the theoretical trajectory based on the expression of the friction force.
Since two out of four C. elegans frizzled genes had already been characterized [ 17, 18], we determined the expression pattern of the two remaining frizzled homologs, T23D8.1 and F27E11.3A, which now have been named mom-5 and cfz-2, respectively [ 19- 21].
To better characterize this interaction, here we determined the SE binding site on CRT.
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