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Frog virus 3 is the best characterized species within the genus Ranavirus, family Iridoviridae.
The 16S rRNA gene sequence of the epibiotic cells showed 87% sequence identity with the type strain sequence of the closest characterized species Halolamina pelagica.
Then, they compared the physical features of the skulls with those of 32 previously characterized species of alligators and caimans from the past and present.
Such overlap will not affect species identification of unknowns in already characterized species but can have impact in incompletely sampled groups [42].
The authors of this study noted that, curiously, the majority of the postulated transcript pairs have no homolog in any other characterized species, similar to the situation in mouse.
Many of the positive relationships identified were with poorly characterized species, for example, the taxa most highly correlated with high LGG abundance were three Verrucomicrobia, two of which are unclassified and the third has the representative species Prosthecobacter dejongeii [57].
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More specific results can be obtained by the use of characterized species-specific antigens, which are produced by molecular engineering.
These comparisons provide the opportunity to assess the ability to leverage the genomic information from highly characterized plant genomes for application in other less well-characterized species.
In conclusion, we demonstrate covariance of DAF-16 mediated phenotypes in the four most well-characterized species of the Caenorhabditis clade.
A study using a Bayesian classifier found that as many as 5.5% of near full length sequences from well-characterized species were taxonomically anomalous at the level of genus in a test against the RDP [7].
The presence of well-characterized species, both molecularly and morphologically, with very low divergences also confounded the use of common thresholds for our datasets, no matter whether they were defined a priori (clustering) or deduced from the data (GMYC).
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