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To establish a robust automated method for the complete family classification of LTR-RTs, we first selected two highly repeated LTR-RT families from maize and soybean that we characterized manually to establish a list of relevant parameters for subsequent analyses of other families in all the eight plant genomes retained in this study.
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The entire population of lakes (>50,000) across the study extent (i.e., the census data) is simply too large and complex to characterize manually.
For comparative purposes, we included well characterized and manually curated resistance genes from Arabidopsis thaliana, Cucumis melo, Hordeum vulgare, Solanum tuberosum, and Zea mays, among others (Additional file 3) into a second phylogenetic tree.
To this end we manually characterized all the profiles obtained in the time interval from 1900 to 2200 LT for the years 1993 2004.
To evaluate potential changes in sleep architecture (duration and intensity of different stages of sleep) with age, we manually characterized sleep and wake behavior for the first four hours of a single active and inactive period (see Methods).
In addition, the DEGs were further manually characterized with GO and NR database annotation by reviewing previous studies.
To evaluate our method for optimal detection of variants, we manually characterized lethal mutations generated in our screen and tested the bioinformatics software for the ability to detect these same mutations in an unbiased fashion.
Usually several single-layer battery cells of the developed material are assembled manually and characterized electrochemically.
Their nuclei, which can be readily isolated manually, are characterized by an extremely high density of nuclear pore complexes (NPCs).
Table S1 of the supporting information provides a list of all characterized catemers, which were manually checked to confirm that they are not part of large rings.
Here, we thus characterized the internal structure of manually pulled fibronectin fibers by electron microscopy.
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