An increasing understanding of the design principles underlying natural systems and a well characterized list of components have allowed researchers to build circuits that achieve complex tasks (reviewed in Ref. 77).
To characterize lists of differentially expressed genes based on gene ontology annotation, we used Enrichment Analysis Systematic Explorer (EASE) [ 23], as previously described [ 3, 5].
To further investigate the presence of putative repetitive elements in the assembly, we compared the assembly to the Plant Repeat Database, which provides a comprehensive well-characterized list of the most common plant repeats [ 40].
The FBI did not characterize the list of names Hodgkinson carried as a hit list.
The program provides the output tables including the verifications, parameters characterizing the dispersion and list of the genes outside specified probability intervals.
In the present investigation, we characterized and generated a complete list of the tomato RLK superfamily members (Additional files 2 and 5), identifying 647 RLKs, which falls in the size range of the Arabidopsis (623 RLKs) and soybean (605 RLKs) superfamilies.
The system state is characterized by the list of resources acquired by the system and the list of requests for each resource.
The gene report lists all the information related to each gene which is stored in the database, starting from the basic gene description, its sequence and its corresponding protein, but also including more specific information, such as the list of the SNP characterizing that gene, or the list of cDNA and isoform.
A class comparison of the patients in the four different survival subtypes of the 295 NKI breast cancer patients generated by PCT-TC stratification by one-way ANOVA analysis provided a list of the genes that characterized the different prognostic groups.
Alternatively, the gene set characterized by the list of 'important eye-stalk' BP categories may not reflect the processes that are actually important in eye-stalk evolution or rates of protein evolution may not provide a valuable indicator of their relevance to eye-stalk evolution.
Well characterized links (WCLs) are those characterized at least by one methodology of each group (for an exhaustive list of the experimental methods in each group see [ 18]).
