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HaCaT cells are well characterized in reference to their biological and malignant properties [ 20- 23].
Pathogenic effects on donor female patients were assessed by clinical and histopathological findings and rated according to increasing severity by four arbitrary units characterized in reference [ 2] (page 148).
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The model is described and characterized in details in reference [22], where it was verified that the cloned construct MOP-EGFP exhibits properties similar to the native MOP that the construct inserted in the plasma membrane, is sensitive and selective to its specific ligands and coupled to the cellular trafficking machinery (Fig. 1A).
Three of these cps loci matched those previously characterized in the ST11 reference genome HS11286 (genotype wzi-74/ cpserotype, serotype K74) and in ST258/512 K. pneumoniae (genotypes wzi-29/cps207-2 and wzi-154/ cpsBO-4; unknown serotypes) (Chen et al. 2014; D'Andrea et al. 2014; Deleo et al. 2014).
Uniqueness could also be characterized in contrast with other reference patterns from different peptides or peptide fragments (each appropriately translated to the parent m/ z) or other ways of scrambling the target reference pattern different from m/ z translation.
After one round of ICORN iteration, 68 (91%) out of 75 SNPs and 6 (67%) out of 9 indels (relative to the assembly of short reads) were successfully characterized in the HPV-16 reference and corrected.
All of the known AsA-related genes are fully characterized in Arabidopsis thaliana (see references in supplementary table S1, Supplementary Material online), a model plant that has provided valuable insights into angiosperm genome structure, function, and evolution.
Table 1 shows the origin of all reference isolates characterized in the present study and Figure 1 shows the analysis of amino acid sequences of vaccine strain and reference strains.
All focal and reference specimens were characterized in an identical manner.
9,057 full-length reference genes were characterized in S. salar and can be used to identify alleles and gene family members.
To the characterization of conserved amino acids and motifs a full-length multiple alignment was conducted using the 48 Cucurbitaceae MLO proteins identified in this study and 12 reference MLO proteins characterized in other species (Additional file 4).
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